COLMARvista: a web-based 2D NMR viewer

For autonomous processing, peak picking, peak fitting, and pseudo-3D fitting

Instructions

Save current session to a local file
Load previous session:

Bruker time domain data for processing: (Console version >=3.0, Fnmode: Echo-antiecho or State-TPPI only)

fid file (required, usually called fid or ser):
Direct dimension acquisition file (required, usually called acqus):
Indirect dimension acquisition file (required, usually called acqu2s (in pseudo-3D, might be acqu3s or acqu2s)):
NUS list file (for NUS experiment only, usually called nuslist):
You can also drag and drop Bruker folder (which contains required files here).

Water suppression? Direct dimension apodization function Zero filling factor for direct dimension (2, 4, 8): Phase correction for direct dimension P0: P1: Automated PC Delete imaginary data Extract direct dimension from (percentage): to Indirect dimension apodization function Zero filling factor for indirect dimension (2, 4, 8): Phase correction for indirect dimension P0: P1: Automated PC Delete imaginary data polynomial baseline correction at order Negative imaginary data (indirect dimension)? pseudo-3D acquisition sequence Process the first plane only Process all planes

Frequency domain spectra:

You can also drag and drop spectral file(s) in nmrPipe format or folder contains them here.

Pseudo-3D fitting tool

Max round of pseudo-3D fitting: Run MC based error estimation Generate reconstructed spectra for all planes

Show pseudo-3D fitting result
Upload an peak file with assignment information to be transferred to pseudo-3D fitted peaks (.list):

DOSY gradient values (space separated):
Weight: (e.g. 1 0 0 1 1)
Rescale factor:

Use this button to run pseudo-3D on all experimental spectra. The current showing peak list will be used as the initial guess. You can download pseudo-3D fitting result after finished.

COLMARvista: a web-based 2D NMR viewer

For autonomous processing, peak picking, peak fitting, and pseudo-3D fitting

Instructions

Your spectra list:

Background server log: